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  Resources: General Microbiology: Databases

 
Categories:
  Culture Collections@ (31)
  Genetic (34)

Links:
  • Astrobiology Micro*Scope
    This site has images of microbes, classification schemes, descriptions of organisms, talks and other educational resources to improve awareness of the biodiversity of our microbial partners.
    http://www.mbl.edu/microscope
  • Biocatalysis/Biodegradation Database
    Microbial biocatalytic reactions and biodegradation pathways primarily for xenobiotic, chemical compounds. Site by The University of Minnesota.
    http://umbbd.ahc.umn.edu/
  • Biodegradative Strain Database (BSD)
    Consolidating and providing rapid access to comparative data on known biodegradative microorganisms and the hazardous substances they degrade as a readily accessible resource for researchers and field practitioners.
    http://bsd.cme.msu.edu/bsd/
  • CMS Molecular Biology Resource  updated
    A compendium of electronic and internet accessible tools and resources for molecular biology, biotechnology, molecular evolution, biochemistry, and molecular modeling.
    http://restools.sdsc.edu/
  • CORTBASE
    A nomenclatural database of corticioid fungi (Hymenomycetes).
    http://www.systbot.gu.se/database/cortbase/cortbase.html
  • dictyBase
    An online informatics resource for dictyostelium.
    http://www.dictybase.org/
  • EXPASY (expert protein analysis system)
    The ExPASy (Expert Protein Analysis System) proteomics server of the Swiss Institute of Bioinformatics (SIB) is dedicated to the analysis of protein sequences and structures as well as 2-D PAGE.
    http://us.expasy.org/
  • HIV Databases
    Containing data on HIV genetic sequences, immunological epitopes, drug resistance-associated mutations, and vaccine trials. The website also gives access to a large number of tools that can be used to analyze these data.
    http://hiv-web.lanl.gov/content/
  • Makmal Penyelidikan Bioinformatik
    Malaysian Indigenous Microbial Online Database System (MIMODS) consists of data on indigenous microorganisms isolated by Malaysian Microbiologists. Currently there are five databases which are Algae, Bacteria, Fungi, Virus and Protozoa which are integrated to produce MIMODS. The databases are continually evolving as more researchers add their data into the system.
    http://www.bioinformatik.um.edu.my/
  • National Center for Biotechnology Information (NCBI)
    The NCBI has been charged with creating automated systems for storing and analyzing knowledge about molecular biology, biochemistry, and genetics; facilitating the use of such databases and software by the research and medical community; coordinating efforts to gather biotechnology information both nationally and internationally; and performing research into advanced methods of computer-based information processing for analyzing the structure and function of biologically important molecules.
    http://www.ncbi.nlm.nih.gov/
  • The E.coli database collection
    This collection offers you all information regarding the entire E.coli K12 chromosome and is searchable in different ways: by a gen/sequence map, scrolling different tables or just by search for a keyword.
    http://www.uni-giessen.de/~gx1052/ECDC/ecdc.htm
  • The international ImMunoGeneTics information systemŽ
    IMGT is a high-quality integrated information system specialising in immunoglobulins (IG), T cell receptors (TR), major histocompatibility complex (MHC) and related proteins of the immune system of human and other vertebrate species, created in 1989 by Marie-Paule Lefranc (Université Montpellier II, CNRS).
    http://imgt.cines.fr/
  • The Poxvirus Bioinformatics Resource Center
    Established to provide resources to the scientific community for basic research and to facilitate the development of novel antiviral therapies and vaccines against human orthopoxvirus infections as well as approaches for environmental detection of virions and the rapid diagnosis of disease.
    http://www.poxvirus.org/
  • World Anthrax Data Site
    Contains occurrence data, as well as guidelines for the monitoring and control of the disease in humans and animals.
    http://www.vetmed.lsu.edu/whocc/mp_world.htm
  • World Data Centre for Microorganisms
    WFCC-MIRCEN World Data Centre for Microorganisms (WDCM) provides a comprehensive directory of culture collections, databases on microbes and cell lines, and the gateway to biodiversity, molecular biology and genome projects.
    http://wdcm.nig.ac.jp/
 
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